DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9897 and Sems

DIOPT Version :10

Sequence 1:NP_001286753.2 Gene:CG9897 / 37651 FlyBaseID:FBgn0034807 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster


Alignment Length:262 Identity:52/262 - (19%)
Similarity:86/262 - (32%) Gaps:79/262 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RIINGN-TVNIKDAPWYASIIVNSKLKCGGAIISKNYILTAAKCVDGYSARSIQVRLGTSSCGTS 85
            |:|.|. |.|.|...:..::...:...|||.:|.:..:||||.|.:.        |....:....
  Fly    43 RVIGGRVTTNAKLGGYLVAMRYFNNFICGGTLIHELIVLTAAHCFED--------RAEKEAWSVD 99

  Fly    86 GSIAGICKVKVHSQYSSWRF-------------------------DNNLALLKTCELLNTTDEIK 125
            |.|:.:.:..:..|..  ||                         ..|:..|..|....|..:..
  Fly   100 GGISRLSEKGIRRQVK--RFIKSAQFKMVTMNMDVAVVLLNRPMVGKNIGTLSLCSTALTPGQTM 162

  Fly   126 PIERADKV-PDDNSRANVTGCGGRSGNFLDLILDLRISSGIEEKCFQLPVQLHGTQVRILSQKQC 189
            .:...... |||....::                                 |....|.::.::.|
  Fly   163 DVSGWGMTNPDDEGPGHM---------------------------------LRTVSVPVIEKRIC 194

  Fly   190 AADWKVIPFYLLKGISDLTICTKSPG-KGACSTDRGSPLVIDNKLVGILS-RAGCSIK--PDVYA 250
            ...::.     ...|||...|....| |.||:.|.|.|||.:.::.||:| ..||:.:  |.||.
  Fly   195 REAYRE-----SVSISDSMFCASVLGKKDACTYDSGGPLVYEKQVCGIVSFGIGCASRRYPGVYT 254

  Fly   251 NI 252
            ::
  Fly   255 DV 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9897NP_001286753.2 Tryp_SPc 22..258 CDD:214473 52/262 (20%)
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 52/262 (20%)

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