DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and YBX3

DIOPT Version :10

Sequence 1:NP_611739.1 Gene:CNBP / 37646 FlyBaseID:FBgn0034802 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_003642.3 Gene:YBX3 / 8531 HGNCID:2428 Length:372 Species:Homo sapiens


Alignment Length:385 Identity:76/385 - (19%)
Similarity:143/385 - (37%) Gaps:95/385 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VLQEQLECVQSQAPDKLAAETVAEPDYKRVSDEVIRNQQNQIQLIKEEKDTFEKLWQSSQRTIRI 105
            :|..|.:...|::|..:|           ||:.||::.|.|.:||.||    .||.......:.:
Human   588 ILSNQRDMCVSKSPGSVA-----------VSNGVIKHSQFQEKLISEE----SKLMSDESCDLDV 637

  Fly   106 -----------LE-LEIHEYRRQLKQPKGILEVRQQYVAAVQLLEQNLTGVRASLDEKIAENRHL 158
                       || |.:.:|....::.|  :::....:..|..|::  .|:.....:|||....|
Human   638 EDEEPLTLHGTLEALSLFDYISTFEKEK--IDMESLLMCTVDDLKE--MGIPLGPRKKIANFVKL 698

  Fly   159 Q----NEQRTAKERMQELEEELKGKQQQQQQPESLERTMRDKSELETLLDTAAALARQHMSRENL 219
            :    .:::.|.|:...|....||:.:...:.:.:.....:.:|.:..|...|.::...:..|:.
Human   699 KAAKLEQKKAAAEKKAALAALTKGQDESAPKTKEMASPSSESNESKRKLSVGAYVSSVRVDYESF 763

  Fly   220 ALVKVQEALQIADSAIEEKNCVVRREQDAREECDF-LASTIGQVM--------EEAAR------- 268
            .:...|  :.:|.|::           |...|..| |.|.||.::        :|..|       
Human   764 EVGTGQ--VSVAYSSL-----------DFEPEIFFALGSPIGMLLTIRGVARIDEKYRLPTCKGF 815

  Fly   269 -KVEHELGGL---------------------RSGYERRIGELERALDQTRSTLETQVQRTSQAET 311
             .:.|.|..:                     ..|.:|...||:.:|.:..|.|:...  .|..::
Human   816 FNIYHPLDPVAYRLEPMIAPDLDLKAVLVPHHKGRKRLHLELKESLSRMGSDLKQGF--ISSLKS 878

  Fly   312 RARTVEEKFRALLKTNQNLDTDLRAASKMIIEMELKMEALQKTMAKEKETNRACSAREED 371
            ..:|:.|..||...|.| |..:|...:..|.|.|      :|.:.:||.......:::||
Human   879 AWQTLNEFARAHTSTTQ-LQEELEKVANQIKEEE------EKQVVEEKIVESPELSKDED 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_611739.1 PTZ00368 6..161 CDD:173561 29/135 (21%)
YBX3NP_003642.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82
CSD 91..160 CDD:278729
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..372
Blue background indicates that the domain is not in the aligned region.

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