DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and AT3G42860

DIOPT Version :10

Sequence 1:NP_611739.1 Gene:CNBP / 37646 FlyBaseID:FBgn0034802 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_189872.1 Gene:AT3G42860 / 823332 AraportID:AT3G42860 Length:372 Species:Arabidopsis thaliana


Alignment Length:168 Identity:46/168 - (27%)
Similarity:70/168 - (41%) Gaps:63/168 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQFGHFARACP 71
            ||||.:.||:||||::....||             ::.....|      .|:||.:.||:     
plant   239 CYKCGKEGHWARDCTVQSDTGP-------------VKSTSAAG------DCFKCGKPGHW----- 279

  Fly    72 EEAERCYRCNGIGHISKDCT-QADNP--------------TCYRCNKTGHWVRNCP-EAVNERGP 120
                           |:||| |:.||              .||:|.|.|||.|:|. ::.|::..
plant   280 ---------------SRDCTAQSGNPKYEPGQMKSSSSSGECYKCGKQGHWSRDCTGQSSNQQFQ 329

  Fly   121 TNVS--------CYKCNRTGHISKNCPETSKTCYGCGK 150
            :..:        ||||.:.||.|::|...::|....||
plant   330 SGQAKSTSSTGDCYKCGKAGHWSRDCTSPAQTTNTPGK 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_611739.1 PTZ00368 6..161 CDD:173561 46/168 (27%)
AT3G42860NP_189872.1 zf-GRF 94..139 CDD:462017
zf-GRF 163..206 CDD:462017
PTZ00368 233..357 CDD:173561 43/156 (28%)
Blue background indicates that the domain is not in the aligned region.

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