DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and AT2G12880

DIOPT Version :10

Sequence 1:NP_611739.1 Gene:CNBP / 37646 FlyBaseID:FBgn0034802 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_178944.1 Gene:AT2G12880 / 815767 AraportID:AT2G12880 Length:119 Species:Arabidopsis thaliana


Alignment Length:139 Identity:29/139 - (20%)
Similarity:56/139 - (40%) Gaps:38/139 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 AEPDYKRVSDEVIRNQQNQIQLIKEEKDTFEKLWQSSQRTIRILE------LEIHEYRRQLK--- 118
            |:..|.:..|.|   ::.::|.:.......:.|    .|..||::      |::.|:.:.|:   
plant    15 AQRQYPQCQDPV---EKLRLQCLARGASGIKGL----GRAFRIMDDNRSSTLDLEEFSKGLQNFG 72

  Fly   119 ---QPKGILEVRQQYVAAVQLLEQNLTGVRASLDEKIAENR-HLQNEQR----TAKERMQELE-- 173
               ||..:|::..|:       :.|..|. .:.||.:...| .:.|.:|    .|.::|....  
plant    73 ISLQPSEVLDIFHQF-------DTNGNGT-INFDEFLISIRPPMSNARRQVILDAFKKMDRTGDG 129

  Fly   174 ----EELKG 178
                |:|||
plant   130 VITIEDLKG 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_611739.1 PTZ00368 6..161 CDD:173561 21/110 (19%)
AT2G12880NP_178944.1 PTZ00368 <27..97 CDD:173561 14/81 (17%)

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