DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and AT2G12880

DIOPT Version :9

Sequence 1:NP_001188992.1 Gene:CNBP / 37646 FlyBaseID:FBgn0034802 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_178944.1 Gene:AT2G12880 / 815767 AraportID:AT2G12880 Length:119 Species:Arabidopsis thaliana


Alignment Length:114 Identity:35/114 - (30%)
Similarity:43/114 - (37%) Gaps:38/114 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RGNDGGGMRRN---REKCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYRCNKT 104
            |.:.....|||   ...||||.:.|||||:|              |:....|.| ..|||.|::.
plant    19 RASYNNDRRRNDYDPRACYKCGKLGHFARSC--------------HVVTQPTTA-YITCYFCSEE 68

  Fly   105 GHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGH 153
            ||....||   |:|..      :.|..||           ||.||...|
plant    69 GHRSNGCP---NKRTD------QVNPKGH-----------CYWCGNQDH 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_001188992.1 PTZ00368 6..161 CDD:173561 35/114 (31%)
AT2G12880NP_178944.1 PTZ00368 <27..97 CDD:173561 33/104 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1535084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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