Protein Alignment CNBP and YBX1

DIOPT Version :10

• Sequence 1: NP_611739.1
• Gene: CNBP / 37646
• FlyBaseID: FBgn0034802
• Length: 165
• Species: Drosophila melanogaster
• Sequence 2: NP_004550.2
• Gene: YBX1 / 4904
• HGNCID: 8014
• Length: 324
• Species: Homo sapiens
• Alignment Length: 134
• Identity: 29/134 - (21%)
• Similarity: 42/134 - (31%)
• Gaps: 49/134 - (36%)

  Fly    27 GPGGVGGGGGGGGGGMRGNDGGGMRR-------NREKCYKCNQFGHFARACPEEAERCYRCNGIG 84
            |..|.|.|.||.||.......||.::       ...|.:...                   ||.|
Human    28 GTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVLGTVKWFNVR-------------------NGYG 73

  Fly    85 HISKDCTQAD---NPTCYRCNKTGHWVRNC----------------PEAVNERGPTNV----SCY 126
            .|:::.|:.|   :.|..:.|....::|:.                .||.|..||..|    |.|
Human    74 FINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKY 138

  Fly   127 KCNR 130
            ..:|
Human   139 AADR 142

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CNBP	NP_611739.1	PTZ00368	6..161	CDD:173561	29/134 (22%)
YBX1	NP_004550.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..49		8/20 (40%)
		Interaction with ss-DNA. /evidence=ECO:0000269|PubMed:11851341	15..71		11/61 (18%)
		CSD	59..128	CDD:278729	13/87 (15%)
		C5-methylcytosine binding. /evidence=ECO:0000269|PubMed:31358969, ECO:0007744|PDB:6A6L	65..70		0/23 (0%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	120..324		9/23 (39%)