DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and Zcchc14

DIOPT Version :9

Sequence 1:NP_001188992.1 Gene:CNBP / 37646 FlyBaseID:FBgn0034802 Length:165 Species:Drosophila melanogaster
Sequence 2:XP_344781.5 Gene:Zcchc14 / 365018 RGDID:1309494 Length:1087 Species:Rattus norvegicus


Alignment Length:39 Identity:18/39 - (46%)
Similarity:19/39 - (48%) Gaps:5/39 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYK 59
            ||.|||     ||||||||||.......|.......|:|
  Rat   163 SLNGGG-----GGGGGGGGGGKSAPGPSGALPTCSACHK 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_001188992.1 PTZ00368 6..161 CDD:173561 18/39 (46%)
Zcchc14XP_344781.5 PX_domain 261..342 CDD:295365
SAM_ZCCH14 437..501 CDD:188957
SAM 444..495 CDD:197735
zf-CCHC 1046..1061 CDD:278525
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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