DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and cnbpa

DIOPT Version :10

Sequence 1:NP_611739.1 Gene:CNBP / 37646 FlyBaseID:FBgn0034802 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_956043.2 Gene:cnbpa / 326846 ZFINID:ZDB-GENE-030131-5045 Length:163 Species:Danio rerio


Alignment Length:175 Identity:60/175 - (34%)
Similarity:82/175 - (46%) Gaps:35/175 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSMSAT-CYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQFG 64
            |.||.: |:.|.|.||:.::|.          ..|.|.|.|..||.|        ..||:|.:.|
Zfish     1 MDMSTSECFGCGRSGHWIKNCP----------NAGRGRGRGRGRGKD--------LFCYRCGEQG 47

  Fly    65 HFARACPEEAERCYRCNGIGHISKDCTQAD---NPTCYRCNKTGHWVRNCPEAVNERGPT----- 121
            |.||.|.:..:.||.|:..||||:||.:..   ...||.|.|.||..|:|..|..::..:     
Zfish    48 HIARDCEQTEDACYNCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFG 112

  Fly   122 -------NVSCYKCNRTGHISKNCPE-TSKTCYGCGKSGHLRREC 158
                   .|.||:|...||::..|.: |...||.|||:|||.|:|
Zfish   113 HIQKLCDKVKCYRCGEIGHVAVQCSKATEVNCYNCGKTGHLARDC 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_611739.1 PTZ00368 6..161 CDD:173561 57/170 (34%)
cnbpaNP_956043.2 COG5222 <8..>22 CDD:227547 5/13 (38%)
PTZ00368 40..157 CDD:173561 43/116 (37%)

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