DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and Zcchc9

DIOPT Version :9

Sequence 1:NP_001188992.1 Gene:CNBP / 37646 FlyBaseID:FBgn0034802 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001013174.1 Gene:Zcchc9 / 309986 RGDID:1307450 Length:271 Species:Rattus norvegicus


Alignment Length:122 Identity:34/122 - (27%)
Similarity:48/122 - (39%) Gaps:29/122 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RRNREKCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPEAV 115
            ::|...|:.|.|.||....||...|......||              ||||..|.|.:..|...|
  Rat   124 KKNAMVCFHCRQPGHGIADCPAVLESQDMGTGI--------------CYRCGSTEHEMTKCRANV 174

  Fly   116 NERGPT-----NVSCYKCNRTGHISKNCPETSKTCYG-------CGKSGHLRRECDE 160
            :   |.     ...|:.|...||:|::||:.:|..|.       ||...|.:::|.|
  Rat   175 D---PALGEFPFAKCFVCGEMGHLSRSCPDNTKGVYADGGGCKLCGSVEHFKKDCPE 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_001188992.1 PTZ00368 6..161 CDD:173561 34/122 (28%)
Zcchc9NP_001013174.1 PTZ00368 <130..229 CDD:173561 33/116 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1535084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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