DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3788 and Upp1

DIOPT Version :10

Sequence 1:NP_611738.1 Gene:CG3788 / 37644 FlyBaseID:FBgn0034800 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_033503.2 Gene:Upp1 / 22271 MGIID:1097668 Length:311 Species:Mus musculus


Alignment Length:287 Identity:141/287 - (49%)
Similarity:191/287 - (66%) Gaps:2/287 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NPCLKCLQPDILYHLGLNTETTDFPKVFGDVRFVCMGGTPGRMENFAYYVMQEIGLKINAATKLR 121
            ||.:..::.|:|||..|:|.|.|||.:||||:|||:||:..||..|..||..|:||. :...:..
Mouse    24 NPNIAAMKEDVLYHFNLSTSTHDFPAMFGDVKFVCVGGSSSRMNTFIKYVAAELGLD-HPGKEYP 87

  Fly   122 NISEAGQRFSLFKVGPVLCASHGMGCPSISILLHELIKMMYHAKCKDPVFIRIGTSGGIGVEPGT 186
            ||.....|::::|.||||..|||||.|||.|:|||||||:|||:|.:...||||||||||:|||:
Mouse    88 NICAGTDRYAMYKAGPVLSVSHGMGIPSIGIMLHELIKMLYHARCSNITIIRIGTSGGIGLEPGS 152

  Fly   187 VIISSEAIDGRLNPVHEILVHGVSVQHASQLDESLADEIKMCHDPCKDKYEAVIGRTLCAHDFYE 251
            |:|:.:|::....|..|.:|.|..|...:.||..|..|:..|.... :::..|:|.|:|..||||
Mouse   153 VVITQQAVNECFKPEFEQIVLGKRVIRNTNLDAQLVQELVQCSSDL-NEFPMVVGNTMCTLDFYE 216

  Fly   252 GQSRLDGAFCEYTPEMKKSYLETLQSQQVKNIEMESLAFAALTSRANIRGAVVCVAILNRLNGDQ 316
            ||.|||||.|.||.:.|:|||....:..|:||||||..||.:.|...::.|||||.:|:||.|||
Mouse   217 GQGRLDGALCSYTEKDKQSYLRAAHAAGVRNIEMESSVFATMCSACGLKAAVVCVTLLDRLQGDQ 281

  Fly   317 IKTPHDVLSKWEKRPQELVARYIRKVL 343
            |.||||||.::::|||.||..:|:|.|
Mouse   282 INTPHDVLVEYQQRPQRLVGHFIKKSL 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3788NP_611738.1 euk_UDPppase 57..345 CDD:130780 141/287 (49%)
Upp1NP_033503.2 UP_hUPP-like 32..306 CDD:350163 137/275 (50%)

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