DRSC/TRiP Functional Genomics Resources

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Protein Alignment ReepA and HVA22H

DIOPT Version :10

Sequence 1:NP_001188988.1 Gene:ReepA / 37643 FlyBaseID:FBgn0261564 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_564100.1 Gene:HVA22H / 838584 AraportID:AT1G19950 Length:315 Species:Arabidopsis thaliana


Alignment Length:312 Identity:67/312 - (21%)
Similarity:117/312 - (37%) Gaps:73/312 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 GTLYPAYASYKAVRTK--DVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYYEVKVALVFWLL 224
            |..||||..||||...  ::::...|..|||:.|..|..|...|...||:|.|.|.|:|...:|.
plant    15 GYAYPAYECYKAVEKNKPEMQQLRFWCQYWILVAALTIFERVGDALASWVPLYCEAKLAFFIYLW 79

  Fly   225 SPATKGSSTLYRKFVHPMLTRHEQEIDEYVNQAKERGYSAVLQLGSKGVNYATNVLMQTAIKGGG 289
            .|.|:|::.:|..|..|.:.:||.|||.           ::::|.:|..:.|. :..:.|:..|.
plant    80 FPKTRGTTYVYDSFFQPYVAKHENEIDR-----------SLIELRTKAGDLAV-IYCRKAVSYGQ 132

  Fly   290 NLVQTIKRSYSLSDLSEPD---------MHRTQDELDDVMMSSMTSSA------------VVMRS 333
            ..:..|....:|....:|.         ....:.:..|:..:|..:|:            :|.:.
plant   133 TRIVEILHFVALQSTPKPKPKEKKQAAAPEEEEQKQPDLKATSQAASSNPQVRLQSKKPQLVTKE 197

  Fly   334 TATGARLLRPRNQTPVGRSGSGTRHSTGMYFTEVDVTA----------------------KNAGD 376
            ..:...|..||.|..:.......:.|.    ::..:|.                      :||..
plant   198 PISPKPLSSPRKQQQLQTETKEAKASV----SQTKLTTLTPPGPPPPPPPPPPSPTTAAKRNADP 258

  Fly   377 FNYNIRSQDDISSGYSS-AEPVSGLSRTSS-----------MTNASKARAKS 416
            ...:....::.|...:: .||.|.:.|.||           :|..|..:|:|
plant   259 AQPSPTEAEEASQTVAALPEPASEIQRASSSKETIMEETLRITRGSLRKARS 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepANP_001188988.1 TB2_DP1_HVA22 166..242 CDD:460820 28/77 (36%)
HVA22HNP_564100.1 TB2_DP1_HVA22 19..97 CDD:460820 28/77 (36%)

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