DRSC/TRiP Functional Genomics Resources

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Protein Alignment ReepA and AT5G42560

DIOPT Version :10

Sequence 1:NP_001188988.1 Gene:ReepA / 37643 FlyBaseID:FBgn0261564 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_568606.1 Gene:AT5G42560 / 834262 AraportID:AT5G42560 Length:296 Species:Arabidopsis thaliana


Alignment Length:347 Identity:82/347 - (23%)
Similarity:134/347 - (38%) Gaps:78/347 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 SLLFPAFRLFCGTLYPAYASYKAVRTK--DVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYY 213
            |.|.....:..|..||||..||.|...  ::::...|..|||:.|..|..|...|.|:||:|.|.
plant     4 SFLTRGLVMVLGYAYPAYECYKTVEKNRPEIEQLRFWCQYWILVACLTVFERVGDAFVSWVPMYS 68

  Fly   214 EVKVALVFWLLSPATKGSSTLYRKFVHPMLTRHEQEIDEYVNQAKER-GYSAVL---QLGSKGVN 274
            |.|:|...:|..|.|:|::.:|..|..|.|::||.:||..:.:.:.| |..||:   ::.|.|..
plant    69 EAKLAFFIYLWYPKTRGTTYVYESFFRPYLSQHENDIDHSLLELRTRAGDMAVIYWQRVASYGQT 133

  Fly   275 YATNVLMQTAI----------KGGGNLVQT-IKRSYSLSDLSEPDMHRTQDELDDVMMSSMTSSA 328
            ....:|...|.          |.||...|. .|...:....|||         ::|.:||.:||:
plant   134 RILEILQYVAAQSTPRPQPPQKRGGRANQAPAKPKKAPVPQSEP---------EEVSLSSSSSSS 189

  Fly   329 VVMRSTATGARLLRPRNQTPVGRSGSGTRHSTGMYFTEVDVTA------KNAGDFNYNIRSQDDI 387
                              :........||..:|.......||:      ||||....   :|..:
plant   190 ------------------SSENEGNEPTRKVSGPSRPRPTVTSVPAADPKNAGTTQI---AQKSV 233

  Fly   388 SSGYSSAEPVSGLSRTSSMTNASKARAKSKRNELLEEMRDEVYLDNQLYFQGVQRKSSVPEAEEL 452
            :|      |:....::::.....:          :||:..|....|:         :..||..:.
plant   234 AS------PIVNPPQSTTQVEPMQ----------IEEVEGEAESGNE---------NPNPEGPKE 273

  Fly   453 KIVESSESIQSQELEKVLKEEN 474
            .::|.:..:....|.|...||:
plant   274 TVMEETIRMTRGRLRKTRSEES 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepANP_001188988.1 TB2_DP1_HVA22 166..242 CDD:460820 28/77 (36%)
AT5G42560NP_568606.1 TB2_DP1_HVA22 19..97 CDD:460820 28/77 (36%)

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