DRSC/TRiP Functional Genomics Resources

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Protein Alignment ReepA and HVA22J

DIOPT Version :10

Sequence 1:NP_001188988.1 Gene:ReepA / 37643 FlyBaseID:FBgn0261564 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_565832.1 Gene:HVA22J / 818175 AraportID:AT2G36020 Length:258 Species:Arabidopsis thaliana


Alignment Length:282 Identity:70/282 - (24%)
Similarity:110/282 - (39%) Gaps:72/282 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 LFCGTLYPAYASYKAVRTK--DVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYYEVKVALVF 221
            |..|..|||:..:|.|...  |::|...|..|||:.|..:..|...|.||||||.|.|:||....
plant    12 LILGYTYPAFECFKTVEKNKVDIEELRFWCQYWILLALISSFERVGDFFISWLPLYGEMKVVFFV 76

  Fly   222 WLLSPATKGSSTLYRKFVHPMLTRHEQEIDE---------------YVNQAKERGYSAVLQLGSK 271
            :|..|.|||:..:|...:.|.:.:||.|||.               |.|...:.|.|.::|    
plant    77 YLWYPKTKGTRHVYETLLKPYMAQHETEIDRKIMELRARAWDFFIFYFNNFAQAGQSTLIQ---- 137

  Fly   272 GVNYATNVLMQTAIKGGGNLVQTIKRSYSLSDLSEPDMHRTQD-------ELDD---------VM 320
            |..|.              |.|:::  :|.:..::|...|..:       |:|:         .:
plant   138 GFQYV--------------LAQSVR--FSAAAANQPPTERNVNMNAQSPVEMDNDPPSPRAPRPL 186

  Fly   321 MSSMTSSAVVMRSTATGARLLRPRNQTPVGRSGSGTRHSTGMYFTEVDVTAKNAGDFNYNIRSQD 385
            ..|:::...:.:.|:.|.:...|......||..:||.:                ||...||   .
plant   187 NKSLSALRSLEKQTSRGRKWPPPTPPPTPGRDSAGTFN----------------GDDGVNI---P 232

  Fly   386 DISSGYSSAEPVSGLSRTSSMT 407
            |...|....:..:.|.|::|.|
plant   233 DTIPGSPLTDARAKLRRSNSRT 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepANP_001188988.1 TB2_DP1_HVA22 166..242 CDD:460820 29/77 (38%)
HVA22JNP_565832.1 TB2_DP1_HVA22 19..97 CDD:460820 29/77 (38%)

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