DRSC/TRiP Functional Genomics Resources

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Protein Alignment ReepA and Reep4

DIOPT Version :10

Sequence 1:NP_001188988.1 Gene:ReepA / 37643 FlyBaseID:FBgn0261564 Length:716 Species:Drosophila melanogaster
Sequence 2:XP_006519661.1 Gene:Reep4 / 72549 MGIID:1919799 Length:293 Species:Mus musculus


Alignment Length:267 Identity:108/267 - (40%)
Similarity:133/267 - (49%) Gaps:84/267 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 ICSLIVIFLAPRTCAQSLLFPAFRLFCGTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAFFTCIE 199
            ||.|:|           |:|       |.|||||||||||::|:::|||:|||||||||.|...|
Mouse     6 ICRLVV-----------LIF-------GMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAE 52

  Fly   200 TFTDIFISW------------------------------------LPFYYEVKVALVFWLLSPAT 228
            |||||||||                                    .|||||.|:|.|.|||||.|
Mouse    53 TFTDIFISWSGPRIGRPWGWEGPHHHHHHHLASGSHKPLPLLTHRFPFYYEFKMAFVLWLLSPYT 117

  Fly   229 KGSSTLYRKFVHPMLTRHEQEIDEYVNQAKERGYSAVLQLGSKGVNYATNVLMQTAIKGGGNLVQ 293
            ||:|.||||||||.|:|||:|||..:.|||||.|..:|..|.:.:|.|.:..:|.|.|..|.|..
Mouse   118 KGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAG 182

  Fly   294 TIKRSYSLSDL-SEPD--MHRTQDEL---DDVMMSSMTSSAVVMRSTATGARLLRPRNQTPVGRS 352
            .: ||:|:.|| |.||  :...||.|   |.|                       ||.:.|:|..
Mouse   183 RL-RSFSMQDLRSIPDTPVPTYQDPLYLEDQV-----------------------PRRRPPIGYR 223

  Fly   353 GSGTRHS 359
            ..|.:.|
Mouse   224 PGGLQGS 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepANP_001188988.1 TB2_DP1_HVA22 166..242 CDD:460820 57/111 (51%)
Reep4XP_006519661.1 TB2_DP1_HVA22 19..130 CDD:460820 56/110 (51%)
PRK11675 <247..>279 CDD:183272
Blue background indicates that the domain is not in the aligned region.

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