DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment ReepA and zgc:101744

DIOPT Version :9

Sequence 1:	NP_001188988.1	Gene:	ReepA / 37643	FlyBaseID:	FBgn0261564	Length:	716	Species:	Drosophila melanogaster
Sequence 2:	NP_001013554.2	Gene:	zgc:101744 / 541409	ZFINID:	ZDB-GENE-050320-111	Length:	184	Species:	Danio rerio

Alignment Length:	145	Identity:	43/145 - (29%)
Similarity:	71/145 - (48%)	Gaps:	23/145 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly   130 FNTACICSLIVIFLAPRTCAQSLLFPAFRLFCGTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAF 194
            :..:.:|:||                      |.:||||||.||:.:.:.::..||:.||:|:..
Zfish    53 YGASLLCNLI----------------------GFIYPAYASIKAIESNNKEDDTKWLTYWVVYGL 95

  Fly   195 FTCIETFTDIFISWLPFYYEVKVALVFWLLSPAT-KGSSTLYRKFVHPMLTRHEQEIDEYVNQAK 258
            |:..|.|:|||:.|.||||..|...:.|.::|.: .||..:|.:.|.|...:||...|..|:...
Zfish    96 FSVAEFFSDIFLFWFPFYYAGKCLFLLWCMAPISWNGSQVIYTRVVRPFFLKHEAAFDNVVSDLS 160

  Fly   259 ERGYSAVLQLGSKGV 273
            .:..||...:..:|:
Zfish   161 GKAKSAAETMAKEGL 175

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ReepA	NP_001188988.1	TB2_DP1_HVA22	158..241	CDD:281172	32/83 (39%)
zgc:101744	NP_001013554.2	TB2_DP1_HVA22	55..143	CDD:281172	35/109 (32%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5052
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1473891at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.820