DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ReepA and Reep2

DIOPT Version :10

Sequence 1:NP_001188988.1 Gene:ReepA / 37643 FlyBaseID:FBgn0261564 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_659114.2 Gene:Reep2 / 225362 MGIID:2385070 Length:254 Species:Mus musculus


Alignment Length:158 Identity:93/158 - (58%)
Similarity:120/158 - (75%) Gaps:4/158 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 LFCGTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYYEVKVALVFWL 223
            |..|||||||:|||||:||:||||||||||||||||||..||.|||.:||.|||:|:|:|.|.||
Mouse    12 LIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIILSWFPFYFELKIAFVIWL 76

  Fly   224 LSPATKGSSTLYRKFVHPMLTRHEQEIDEYVNQAKERGYSAVLQLGSKGVNYATNVLMQTAIKGG 288
            |||.|||||.||||||||.|:..|:|||||:.||:::.|..::::|.:|:|.|.|..:..|.||.
Mouse    77 LSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQ 141

  Fly   289 GNLVQTIKRSYSLSDLSEPDMHRTQDEL 316
            |.|.:.: ||:|:.||:   :.|.:|.|
Mouse   142 GVLSEKL-RSFSMQDLT---LIRDEDAL 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepANP_001188988.1 TB2_DP1_HVA22 166..242 CDD:460820 59/75 (79%)
Reep2NP_659114.2 TB2_DP1_HVA22 19..94 CDD:460820 58/74 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..254
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.