DRSC/TRiP Functional Genomics Resources

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Protein Alignment ReepA and C06E1.1

DIOPT Version :9

Sequence 1:NP_001188988.1 Gene:ReepA / 37643 FlyBaseID:FBgn0261564 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_498893.1 Gene:C06E1.1 / 176205 WormBaseID:WBGene00015518 Length:161 Species:Caenorhabditis elegans


Alignment Length:90 Identity:24/90 - (26%)
Similarity:40/90 - (44%) Gaps:10/90 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 PAFRLFCGTLYPAYASYKAVR-TKDVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYYEVKVA 218
            |.|.......:|...|:..:| .|:..:.:  ::|||::|.   :..|....:..:||||..|..
 Worm    62 PLFSHIICIFWPVKESFMILRQQKNPSDNI--LLYWILYAM---VSLFDYSALPGVPFYYFAKTG 121

  Fly   219 LVFWLLSPATKGSSTLYRKFVHPML 243
            |   .||..|.|...| :::..|.|
 Worm   122 L---FLSITTNGFDKL-KEWSEPAL 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepANP_001188988.1 TB2_DP1_HVA22 158..241 CDD:281172 20/83 (24%)
C06E1.1NP_498893.1 TB2_DP1_HVA22 63..>124 CDD:281172 16/68 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12300
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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