DRSC/TRiP Functional Genomics Resources

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Protein Alignment ReepA and yop-1

DIOPT Version :9

Sequence 1:NP_001188988.1 Gene:ReepA / 37643 FlyBaseID:FBgn0261564 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_491033.1 Gene:yop-1 / 171835 WormBaseID:WBGene00022127 Length:183 Species:Caenorhabditis elegans


Alignment Length:112 Identity:35/112 - (31%)
Similarity:63/112 - (56%) Gaps:0/112 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 FCGTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYYEVKVALVFWLL 224
            |.|.:||||.|.||:.:.:.::..:|:.||::||..:.:|.|:...::..|.|:..|...:.:|.
 Worm    66 FMGFVYPAYMSIKAIESSNKEDDTQWLTYWVIFAILSVVEFFSVQIVAVFPVYWLFKSIFLLYLY 130

  Fly   225 SPATKGSSTLYRKFVHPMLTRHEQEIDEYVNQAKERGYSAVLQLGSK 271
            .|:..|::.||.:||.|:..||...||..:....:|..||..:|.::
 Worm   131 LPSFLGAAKLYHRFVKPVAARHSGSIDAKIGNFADRVNSAAGKLANE 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepANP_001188988.1 TB2_DP1_HVA22 158..241 CDD:281172 26/80 (33%)
yop-1NP_491033.1 TB2_DP1_HVA22 60..147 CDD:281172 26/80 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1473891at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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