DRSC/TRiP Functional Genomics Resources

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Protein Alignment nahoda and AT5G48750

DIOPT Version :10

Sequence 1:NP_523815.2 Gene:nahoda / 37641 FlyBaseID:FBgn0034797 Length:1335 Species:Drosophila melanogaster
Sequence 2:NP_199686.1 Gene:AT5G48750 / 834933 AraportID:AT5G48750 Length:255 Species:Arabidopsis thaliana


Alignment Length:156 Identity:29/156 - (18%)
Similarity:55/156 - (35%) Gaps:46/156 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   646 ENGVTTIIFRKKLVANEPTDHTLDDALTHVIWAKGQEPEAYVHVPASGLETQIATVKNFYQQDEL 710
            |.||..:.:|          ||..::.:.:.|  |..|.:...:.|..|.....:...|.:....
plant    65 ETGVLEVAYR----------HTNIESSSWIAW--GINPTSKGMIGAQTLLAYRNSTSGFMRAYTS 117

  Fly   711 KYHGH--QMQRG-----VTQIN--FFEKEKSATSTDRNDLGTNVLDNDCYGHWKYPSNCSPQEHT 766
            ..:|:  .:|.|     |||::  :..:|.:..:|                 ..:|||.:...|.
plant   118 SINGYTPMLQEGPLSFRVTQLSAEYLNREMTIFAT-----------------MVWPSNTTVVNHL 165

  Fly   767 CEYYASWE--TVGKGDEMRWHIETSN 790
                  |:  .:.:||.:..|..:.|
plant   166 ------WQDGPLKEGDRLGMHAMSGN 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nahodaNP_523815.2 LPMO_10 <52..162 CDD:460793
EGF_2 207..238 CDD:400365
DOMON_like 255..>297 CDD:472705
DOMON_DOH <593..693 CDD:187689 10/46 (22%)
DoH 766..918 CDD:214768 5/27 (19%)
AT5G48750NP_199686.1 DOMON_CIL1_like 45..197 CDD:187687 29/156 (19%)
Cytochrome_b_N 187..>252 CDD:474033
Blue background indicates that the domain is not in the aligned region.

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