DRSC/TRiP Functional Genomics Resources

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Protein Alignment nahoda and AT3G61750

DIOPT Version :10

Sequence 1:NP_523815.2 Gene:nahoda / 37641 FlyBaseID:FBgn0034797 Length:1335 Species:Drosophila melanogaster
Sequence 2:NP_191734.1 Gene:AT3G61750 / 825348 AraportID:AT3G61750 Length:398 Species:Arabidopsis thaliana


Alignment Length:115 Identity:28/115 - (24%)
Similarity:46/115 - (40%) Gaps:31/115 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   743 TNVLDNDCYGHWKYPSNCSPQEHTCEYYASWET-VGKGDEMRWHIET-----SNTQTWTGIGFSD 801
            :|:.||         ..|:|         .|.| |.:..|.|.::.|     ..|..|.|||||.
plant    51 SNISDN---------MPCTP---------LWNTFVLRYSENRDNVMTIIVSALYTTGWVGIGFSK 97

  Fly   802 DQRMSQTDAIIGWVDGRSGRPFLMDTWVLGYAPPKLDDRQDIYNASGRIE 851
            :.||..:.|:|||: .:.|...:...::.|      .:|..:....|.::
plant    98 EGRMVGSSAMIGWI-SKKGHAKIKQYYLQG------TERDQVVPDQGELQ 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nahodaNP_523815.2 LPMO_10 <52..162 CDD:460793
EGF_2 207..238 CDD:400365
DOMON_like 255..>297 CDD:472705
DOMON_DOH <593..693 CDD:187689
DoH 766..918 CDD:214768 23/92 (25%)
AT3G61750NP_191734.1 DoH 63..205 CDD:214768 23/85 (27%)
Cyt_b561_FRRS1_like 192..370 CDD:176490
Blue background indicates that the domain is not in the aligned region.

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