DRSC/TRiP Functional Genomics Resources

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Protein Alignment nahoda and AT3G59070

DIOPT Version :10

Sequence 1:NP_523815.2 Gene:nahoda / 37641 FlyBaseID:FBgn0034797 Length:1335 Species:Drosophila melanogaster
Sequence 2:NP_191466.1 Gene:AT3G59070 / 825076 AraportID:AT3G59070 Length:466 Species:Arabidopsis thaliana


Alignment Length:274 Identity:53/274 - (19%)
Similarity:100/274 - (36%) Gaps:54/274 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 HIKL-------SHDGEFIHKDMKVTHFFPNETLRKPEDHEESRWLQGCYYKGSV---VGDAQSNV 82
            |.|:       .:|.::.|  .:|...|       .:||..........:..||   :.:...||
plant   241 HYKIYNLCSEKGYDPKYFH--YRVERVF-------IDDHNVPVLADMLTFTASVRAWMAEDPQNV 296

  Fly    83 RVSLCEGMQGHIKTTNASFLIQPADNASNSDARILHRIQRLMTDKTSSGNDGRTLVDGPITPAQD 147
            ....|:|.:|...|...::|:.  .:...|....|.......||.:.|     |...|..||:|.
plant   297 IAIHCKGGKGRTGTMVCTYLVD--SDQFESAVESLDYFGERRTDTSVS-----TKFQGVETPSQS 354

  Fly   148 ---CSEPTDNNYFSRHSRRRRSPEHFANNDYTVEVLVVVDNQMQRYHETNLKTYVLTLMSIV--- 206
               .......|.|||.....:..:..:...|:::       .:.|.:.|:||..::....:|   
plant   355 RYVAYYEVLKNKFSRQLPPEKQLKIRSIRIYSIQ-------GVGRSNGTDLKVQIIMKKEVVFQC 412

  Fly   207 -------SSVYADASIGSSMKIAVTHISYIHHDLDAQTTAA---KKGLEDFCRFK--QSTNIHHD 259
                   ..::.||. .:|:.|::.....|..|:..:..::   .||.:| |.|.  .:|:...:
plant   413 VCETQGNCKLFFDAG-NNSIVISLDGCPVISGDIKIRFESSANIPKGYDD-CAFYFWFNTSFIEN 475

  Fly   260 VALLLTREQICRNP 273
            ..|.|::.:: .||
plant   476 SRLYLSKNEL-DNP 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nahodaNP_523815.2 LPMO_10 <52..162 CDD:460793 25/115 (22%)
EGF_2 207..238 CDD:400365 6/30 (20%)
DOMON_like 255..>297 CDD:472705 4/19 (21%)
DOMON_DOH <593..693 CDD:187689
DoH 766..918 CDD:214768
AT3G59070NP_191466.1 DOMON_CIL1_like 48..200 CDD:187687
Cyt_b561_FRRS1_like 190..373 CDD:176490 31/147 (21%)
Blue background indicates that the domain is not in the aligned region.

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