DRSC/TRiP Functional Genomics Resources

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Protein Alignment nahoda and AT3G25290

DIOPT Version :10

Sequence 1:NP_523815.2 Gene:nahoda / 37641 FlyBaseID:FBgn0034797 Length:1335 Species:Drosophila melanogaster
Sequence 2:NP_566763.1 Gene:AT3G25290 / 822123 AraportID:AT3G25290 Length:393 Species:Arabidopsis thaliana


Alignment Length:43 Identity:11/43 - (25%)
Similarity:21/43 - (48%) Gaps:2/43 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1082 DLSETRLYIVLGLIAALVLIALIQAFCTIWKTSRKSKNTKEKL 1124
            |..:|....|:.::..:.|  |::|...:....|||.|:.:.|
plant   351 DTYKTAYIAVIAVLGGIAL--LLEAITWVVVLKRKSNNSMKPL 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nahodaNP_523815.2 LPMO_10 <52..162 CDD:460793
EGF_2 207..238 CDD:400365
DOMON_like 255..>297 CDD:472705
DOMON_DOH <593..693 CDD:187689
DoH 766..918 CDD:214768
AT3G25290NP_566763.1 DOMON_CIL1_like 39..195 CDD:187687
Cyt_b561_FRRS1_like 187..373 CDD:176490 5/23 (22%)
Blue background indicates that the domain is not in the aligned region.

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