DRSC/TRiP Functional Genomics Resources

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Protein Alignment nahoda and AT2G30890

DIOPT Version :10

Sequence 1:NP_523815.2 Gene:nahoda / 37641 FlyBaseID:FBgn0034797 Length:1335 Species:Drosophila melanogaster
Sequence 2:NP_180646.1 Gene:AT2G30890 / 817639 AraportID:AT2G30890 Length:257 Species:Arabidopsis thaliana


Alignment Length:80 Identity:23/80 - (28%)
Similarity:33/80 - (41%) Gaps:17/80 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1073 AKETLLSFFDLSETRLYIVLGLIAALVLIALIQAFCTIWK--TSRKSKNTKEKLIQNSPWKEFAS 1135
            ||:|..|      ..|:.:| ..|.|..|||:..|...|.  .|:.:.|..:.:..|       |
plant   184 AKKTSKS------ANLWTIL-FTAQLSCIALVYLFQDKWSYIQSQATFNRNQSVDHN-------S 234

  Fly  1136 NTNYAFDPYG-ETEE 1149
            |.:.|...:| |.||
plant   235 NISTAETGHGYEVEE 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nahodaNP_523815.2 LPMO_10 <52..162 CDD:460793
EGF_2 207..238 CDD:400365
DOMON_like 255..>297 CDD:472705
DOMON_DOH <593..693 CDD:187689
DoH 766..918 CDD:214768
AT2G30890NP_180646.1 Cyt_b561_FRRS1_like 53..213 CDD:176490 12/35 (34%)
Blue background indicates that the domain is not in the aligned region.

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