DRSC/TRiP Functional Genomics Resources

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Protein Alignment nahoda and Frrs1l

DIOPT Version :10

Sequence 1:NP_523815.2 Gene:nahoda / 37641 FlyBaseID:FBgn0034797 Length:1335 Species:Drosophila melanogaster
Sequence 2:NP_001406566.1 Gene:Frrs1l / 366376 RGDID:1309978 Length:293 Species:Rattus norvegicus


Alignment Length:208 Identity:51/208 - (24%)
Similarity:92/208 - (44%) Gaps:37/208 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   750 CYGHWKYPSNCSPQEHTCEYYASWETVGKGDEMRWHIETSNTQTWTGIGFSDDQRMSQTDAIIGW 814
            |:.:.|  ..|:.:  ||:|:.|:..:|...|...   :::|..|..:|||.|::|...| ::..
  Rat   106 CFRYGK--PGCNAE--TCDYFLSYRMIGADVEFEL---SADTDGWVAVGFSSDKKMGGDD-VMAC 162

  Fly   815 VDGRSGRPFLMDTWVLG-YAPPKLDDRQDIYNASGRIEKGVTILEFNR-----KRVSNDEQDLSF 873
            |...:||..:...:.:| :|       :::.....|.|:||  .|.||     ||..|..:|.:.
  Rat   163 VHDDNGRVRIQHFYNVGQWA-------KEVQRNPARDEEGV--FENNRVTCRFKRPVNVPRDETI 218

  Fly   874 TDDHCLYLFFPVLGGAFNVVNKKIRKHE-QVPPISSQRVCIKSCGKELESVFVGT------STPA 931
            .|.|..:.:....|.|   :...|.:|: ..||.|.:.|.|    .:.|.:|:.:      |:|.
  Rat   219 VDLHLSWYYLFAWGPA---IQGSITRHDIDSPPASERVVSI----YKYEDIFMPSAAYQTFSSPF 276

  Fly   932 PSRLVYAVAVKLM 944
            ...|:.|:...|:
  Rat   277 CLLLIVALTFYLL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nahodaNP_523815.2 LPMO_10 <52..162 CDD:460793
EGF_2 207..238 CDD:400365
DOMON_like 255..>297 CDD:472705
DOMON_DOH <593..693 CDD:187689
DoH 766..918 CDD:214768 41/158 (26%)
Frrs1lNP_001406566.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..61
DOMON_SDR_2_like 94..253 CDD:187686 42/166 (25%)
Blue background indicates that the domain is not in the aligned region.

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