DRSC/TRiP Functional Genomics Resources

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Protein Alignment nahoda and Frrs1l

DIOPT Version :10

Sequence 1:NP_523815.2 Gene:nahoda / 37641 FlyBaseID:FBgn0034797 Length:1335 Species:Drosophila melanogaster
Sequence 2:NP_001136437.1 Gene:Frrs1l / 230235 MGIID:2442704 Length:293 Species:Mus musculus


Alignment Length:212 Identity:55/212 - (25%)
Similarity:94/212 - (44%) Gaps:45/212 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   750 CYGHWKYPSNCSPQEHTCEYYASWETVGKGDEMRWHIETSNTQTWTGIGFSDDQRMSQTDAIIGW 814
            |:.:.|  ..|:.:  ||:|:.|:..:|...|...   :::|..|..:|||.|::|...| ::..
Mouse   106 CFRYGK--PGCNAE--TCDYFLSYRMIGADVEFEL---SADTDGWVAVGFSSDKKMGGDD-VMAC 162

  Fly   815 VDGRSGRPFLMDTWVLG-YAPPKLDDRQDIYNASGRIEKGVTILEFNR-----KRVSNDEQDLSF 873
            |...:||..:...:.:| :|       :::.....|.|:||  .|.||     ||..|..:|.:.
Mouse   163 VHDDNGRVRIQHFYNVGQWA-------KEVQRNPARDEEGV--FENNRVTCRFKRPVNVPRDETI 218

  Fly   874 TDDHC--LYLFF--PVLGGAFNVVNKKIRKHE-QVPPISSQRVCIKSCGKELESVFVGT------ 927
            .|.|.  .|||.  |.:.||       |.:|: ..||.|.:.|.|    .:.|.:|:.:      
Mouse   219 VDLHLSWYYLFAWGPAIQGA-------ITRHDIDSPPASERVVSI----YKYEDIFMPSAAYQTF 272

  Fly   928 STPAPSRLVYAVAVKLM 944
            |:|....|:.|:...|:
Mouse   273 SSPFCLLLIVALTFYLL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nahodaNP_523815.2 LPMO_10 <52..162 CDD:460793
EGF_2 207..238 CDD:400365
DOMON_like 255..>297 CDD:472705
DOMON_DOH <593..693 CDD:187689
DoH 766..918 CDD:214768 45/162 (28%)
Frrs1lNP_001136437.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..60
DOMON_SDR_2_like 94..253 CDD:187686 46/170 (27%)
Blue background indicates that the domain is not in the aligned region.

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