DRSC/TRiP Functional Genomics Resources

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Protein Alignment nahoda and C05D12.1

DIOPT Version :10

Sequence 1:NP_523815.2 Gene:nahoda / 37641 FlyBaseID:FBgn0034797 Length:1335 Species:Drosophila melanogaster
Sequence 2:NP_496432.2 Gene:C05D12.1 / 174740 WormBaseID:WBGene00007339 Length:498 Species:Caenorhabditis elegans


Alignment Length:443 Identity:93/443 - (20%)
Similarity:146/443 - (32%) Gaps:129/443 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   754 WKYPSNCSPQE-HTCEYYASWETVGKG----DEMRWHIETSNTQTWTGIGFSDDQRMSQTDAIIG 813
            |.:|..|:... ..|:....|:.:.:|    .|.:.|........:..:|||.:|||.. |.:..
 Worm    37 WFHPPECAADNLAACQSGVEWQMLPEGLFLQLEAKVHDLDQTRPFYAALGFSFNQRMDD-DTVFE 100

  Fly   814 WV-----DGRSGRPFLMDTW--VLGYAPPKLDDRQDIYNASGRIEKGVTILEFNRKRVSNDEQ-- 869
            .|     ||:....|..:|:  ||......|..........|.:.....:|..||..:.||.|  
 Worm   101 CVVPHTGDGKVQISFNDETFNQVLPQGSSVLLTEGTTSYVDGVLTCSAKLLLDNRPLIDNDTQFM 165

  Fly   870 --DLSFTDDHCLYLFFPVLGGAFN--VVNKKIRK---HEQVPPISSQRV--CIKSCGKELESVFV 925
              ||.....|.|:     ..|:.|  .:.|.|..   .:|.|.:|.::|  |..:|         
 Worm   166 VHDLESGSYHLLF-----ARGSANKYTLEKDIHSTNDGQQFPWMSDEQVSFCRTNC--------- 216

  Fly   926 GTSTPAPSRLVYAVAVKLMNLGESYEAPKPGTVEFNNLAATISDSFNGILSP------------L 978
              |:|           .|.::||..:...........:|.     ::|||..            :
 Worm   217 --SSP-----------NLYHIGEMRQTYNVSRYWRYRIAV-----WHGILLMFAWWVLASNAILI 263

  Fly   979 TGYYK-----TEILG----FEKEGSTMVAKVQA-------MFDKAD---VEKKHALETNEVDKTS 1024
            :.|:|     .::||    |:.....|:..|..       :|.:|.   .:..:...:::..|..
 Worm   264 SRYFKPLFPRNKLLGTAVWFQLHRDMMILSVVIQVICVLFIFYQAGWVWYQCSYMCTSDDFSKKM 328

  Fly  1025 EAAAQKNADVIRSALKDQVATGRVGSLTVDPQFLDFEALEYKSSSEP---------------NAK 1074
            .......|.|:  ||...|    .|.|...|          .||..|               .|.
 Worm   329 HGITGFTATVL--ALLQPV----FGFLRPSP----------TSSIRPIFNWGHWLVGMFSWSVAS 377

  Fly  1075 ETLLSFFDLSET---RLY------IVLGLIAALVLIALIQAFCTIWKTSRKSK 1118
            .|::....:.:|   |||      ||||.|...:...||....||  ||.|:|
 Worm   378 ATIVLALPMGKTGLNRLYGHVPNWIVLGYILFFIACNLILEIITI--TSNKTK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nahodaNP_523815.2 LPMO_10 <52..162 CDD:460793
EGF_2 207..238 CDD:400365
DOMON_like 255..>297 CDD:472705
DOMON_DOH <593..693 CDD:187689
DoH 766..918 CDD:214768 41/173 (24%)
C05D12.1NP_496432.2 DOMON_SDR_2_like 24..205 CDD:187686 40/173 (23%)
Cyt_b561_FRRS1_like 217..419 CDD:176490 43/233 (18%)
Blue background indicates that the domain is not in the aligned region.

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