DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nahoda and C44B7.5

DIOPT Version :10

Sequence 1:NP_523815.2 Gene:nahoda / 37641 FlyBaseID:FBgn0034797 Length:1335 Species:Drosophila melanogaster
Sequence 2:NP_495404.1 Gene:C44B7.5 / 174124 WormBaseID:WBGene00016627 Length:236 Species:Caenorhabditis elegans


Alignment Length:168 Identity:40/168 - (23%)
Similarity:60/168 - (35%) Gaps:39/168 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   749 DCYGHWKY----PSNCSPQEHTCEYYASWETVGKGDEMRWHIETSNTQTWTGIGFSDDQRMSQTD 809
            ||....||    |..|...|  |.:..|..:.|...|:.....:...:||..||:|.|::| :.|
 Worm    30 DCLDDHKYCVGLPRGCVGTE--CNFAFSSISNGTHTEIEIFGNSVIDKTWLAIGYSADKKM-EDD 91

  Fly   810 AIIGWVDGRSGRPFLMDTWVLGYAPPKLDDRQDI-YNASGRIEKGVTI------------LEFNR 861
            .::..:...:|...           .|||....: ||.....|...||            |:...
 Worm    92 FVVFCIRDDAGTNM-----------NKLDQMAGLAYNGKHSNEMTGTIENIKKNKNDKFGLDLEM 145

  Fly   862 KRVSNDEQDLSFTDDHC--LYLFFPVLGGAFNVVNKKI 897
            |....|||.|     :|  .:...|:: ..|||...:|
 Worm   146 KEYEKDEQTL-----YCKMAHRVEPII-DRFNVSKVEI 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nahodaNP_523815.2 LPMO_10 <52..162 CDD:460793
EGF_2 207..238 CDD:400365
DOMON_like 255..>297 CDD:472705
DOMON_DOH <593..693 CDD:187689
DoH 766..918 CDD:214768 33/147 (22%)
C44B7.5NP_495404.1 DOMON_SDR_2_like 26..200 CDD:187686 40/168 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.