DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3700 and Cfd

DIOPT Version :9

Sequence 1:NP_611736.1 Gene:CG3700 / 37640 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001071110.1 Gene:Cfd / 54249 RGDID:2498 Length:263 Species:Rattus norvegicus


Alignment Length:280 Identity:83/280 - (29%)
Similarity:132/280 - (47%) Gaps:52/280 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SACQSTP--FIVGGTKASGKEFPFMALI---GTHRPNKSKSDINWDCGGSVVHPKFVLTAAHCLE 153
            :.|.:.|  .|:||.:|.....|:||.:   |||           .|||::|..::||:||||::
  Rat    16 AVCVAQPRGRILGGQEAMAHARPYMASVQVNGTH-----------VCGGTLVDEQWVLSAAHCMD 69

  Fly   154 TDESKAERLDPNFDSPKFVVRLGELDYNSTTDDALVQDFRVVNYVVHPGYDTEDEEQGFKNDIAL 218
             ..:|.|.:.         |.||.  ::.::.:.....:.|.:.|:|||...:..|    :|:.|
  Rat    70 -GVTKDEVVQ---------VLLGA--HSLSSPEPYKHLYDVQSVVLHPGSRPDSVE----DDLML 118

  Fly   219 VELDRKAEFNDHVAAVCLPPDSGNDVQQVT---AAGWG-FTADGVKSSHLLKVNLQRFSDEVCQK 279
            .:|...|....||..:.|..:. .:|:..|   .|||| .|..|.:...|.::.:.......|  
  Rat   119 FKLSHNASLGPHVRPLPLQRED-REVKPGTLCDVAGWGVVTHAGRRPDVLQQLTVSIMDRNTC-- 180

  Fly   280 RLRFSID---TRTQFCAGSMSSQADTCNGDSGGPIFVQHPLYPCLKQVIGIVSYG-LVCGSQGLP 340
            .||...|   |:...||  .|::.|||.||||||:.       |...|..:|::| .|||::..|
  Rat   181 NLRTYHDGAITKNMMCA--ESNRRDTCRGDSGGPLV-------CGDAVEAVVTWGSRVCGNRRKP 236

  Fly   341 SVYTKVHLYTDWIESIVWGN 360
            .|:|:|..|..|||:::.||
  Rat   237 GVFTRVATYVPWIENVLSGN 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113 79/264 (30%)
Tryp_SPc 102..353 CDD:214473 76/261 (29%)
CfdNP_001071110.1 Tryp_SPc 26..252 CDD:238113 79/264 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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