DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3700 and pafah1b3

DIOPT Version :9

Sequence 1:NP_611736.1 Gene:CG3700 / 37640 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001006715.1 Gene:pafah1b3 / 448360 XenbaseID:XB-GENE-485956 Length:226 Species:Xenopus tropicalis


Alignment Length:20 Identity:9/20 - (45%)
Similarity:12/20 - (60%) Gaps:3/20 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 PIPLDHQNL---KPAEQTRP 81
            |.||.::||   |..|:|.|
 Frog   146 PNPLRNRNLQVNKLLEETLP 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113
Tryp_SPc 102..353 CDD:214473
pafah1b3NP_001006715.1 PAF_acetylesterase_like 8..217 CDD:238858 9/20 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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