DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3700 and CG3505

DIOPT Version :9

Sequence 1:NP_611736.1 Gene:CG3700 / 37640 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster


Alignment Length:392 Identity:114/392 - (29%)
Similarity:172/392 - (43%) Gaps:91/392 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILLLIASVSVVTEYCDNGTGECKELTPSDCPVIFYNQHLIG--AEVKYCDEFNDIVCCPIPLDHQ 71
            :|:::.|:::         |...:|.|.:|.....:..:.|  ..::.||.|..|      |...
  Fly     7 LLVVVGSLAL---------GANAQLPPINCVAKIPSGRVTGHCISIRECDYFMRI------LLSG 56

  Fly    72 NLKPAEQTRPFEKQC-KQYNEVRSACQST--------PFI-----------VGGTKASGKEFPFM 116
            ||..:::....:.|| .:.|:|:..|.||        |.:           ...|....:|||::
  Fly    57 NLSQSDRNLLRDNQCGVRGNDVQVCCPSTAGLGALTHPLLPSDCGKVRWQRSNDTDTRIREFPWL 121

  Fly   117 ALIGTHRPNKSKSDINWDCGGSVVHPKFVLTAAHCLETDESKAERLDPNFDSPKFVVRLGELDYN 181
            |||...|.|:.|...   |||.::..::|||||||:      |:....|....  .|||||.|.:
  Fly   122 ALIEYTRGNQEKIHA---CGGVLISDRYVLTAAHCV------AQAATSNLQIT--AVRLGEWDTS 175

  Fly   182 STTD-----DALV-------QDFRVVNYVVHPGYDTEDEEQGFKNDIALVELDRKAEFNDHVAAV 234
            :..|     |:.|       ||..:...:.||.|:..|..|  .||||||.|...|:.||.|..:
  Fly   176 TNPDCQYHEDSKVADCAPPYQDIAIEELLPHPLYNRTDRTQ--INDIALVRLASPAKLNDFVQPI 238

  Fly   235 CLP-----PDSGNDVQQVT-AAGWGFTADGVKSSHLLKVNLQRFSDEVCQKR-----LRFSIDTR 288
            |||     .|...|:  || .|||    ....|..:.|..:...|.|.||::     ||..   .
  Fly   239 CLPNKQLRADELEDL--VTEVAGW----QASSSQRMRKGYVTISSIEECQRKYASQQLRIQ---A 294

  Fly   289 TQFCAGSMSSQADTCNGDSGGPIFV-QHPLYPCLKQVIGIVSYGLV-CGSQGLPSVYTKVHLYTD 351
            ::.| |..:||  .|.|::|||:.: ::..|    .:.|:||:|.| |.:...|.|||:|..|.|
  Fly   295 SKLC-GLTNSQ--ECYGNAGGPLMLFKNDGY----LLGGLVSFGPVPCPNPDWPDVYTRVASYID 352

  Fly   352 WI 353
            ||
  Fly   353 WI 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113 92/288 (32%)
Tryp_SPc 102..353 CDD:214473 90/286 (31%)
CG3505NP_650380.2 CLIP 30..82 CDD:288855 12/57 (21%)
Tryp_SPc 111..356 CDD:238113 92/273 (34%)
Tryp_SPc 111..354 CDD:214473 90/271 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG25778
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.