DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3700 and Ovch2

DIOPT Version :9

Sequence 1:NP_611736.1 Gene:CG3700 / 37640 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:275 Identity:77/275 - (28%)
Similarity:119/275 - (43%) Gaps:47/275 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 IVGGTKASGKEFPFMALIGTHRPNKSKSDINWDCGGSVVHPKFVLTAAHCLETDESKAERLDPNF 166
            ||||::.....:|:...:        |......|||:::..::|:|||||: .:.:.|..|:   
  Rat    52 IVGGSQVEKGSYPWQVSL--------KQKQKHICGGTIISSQWVITAAHCM-ANRNIALTLN--- 104

  Fly   167 DSPKFVVRLGELDYNSTTDDALVQDFRVVNYVVHPGYDTEDEEQGFKNDIALVELDRKAEFNDHV 231
                  |..||.|.:......  |...:...::||.:.|   ::....||||:::....:|...|
  Rat   105 ------VTAGEHDLSQAEPGE--QTLAIETIIIHPQFST---KKPMNYDIALLKMVGTFQFGQFV 158

  Fly   232 AAVCLPP--DSGNDVQQVTAAGWGFTADGVKSSHLL-KVNLQRFSDEVCQK---RLRFSIDTRTQ 290
            ..||||.  :..|.....|.||||..::|.....:| :|||...:.|.|:.   .||..|..:|.
  Rat   159 RPVCLPEPGEQFNAGYICTTAGWGRLSEGGSLPQVLQQVNLPILTHEECEAVMLTLRNPITGKTF 223

  Fly   291 FCAGSMSSQADTCNGDSGGPIFVQHPLYPCLK---QVIGIVSYGLVCG----------SQGLPSV 342
            .|.||.....|.|.|||||.:..|:     .|   .:.|:.|:||.||          .||.|.:
  Rat   224 LCTGSPDGGRDACQGDSGGSLMCQN-----RKGAWTLAGVTSWGLGCGRSWRNNARKKEQGSPGI 283

  Fly   343 YTKVHLYTDWIESIV 357
            :|.:.....||...|
  Rat   284 FTDLRRVLPWIHEHV 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113 76/272 (28%)
Tryp_SPc 102..353 CDD:214473 74/269 (28%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 76/272 (28%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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