DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3700 and Prss22

DIOPT Version :10

Sequence 1:NP_611736.1 Gene:CG3700 / 37640 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001100454.1 Gene:Prss22 / 302971 RGDID:1310880 Length:307 Species:Rattus norvegicus


Alignment Length:276 Identity:81/276 - (29%)
Similarity:127/276 - (46%) Gaps:52/276 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 IVGGTKASGKEFPFMALI---GTHRPNKSKSDINWDCGGSVVHPKFVLTAAHCLETDESKAERLD 163
            :|||..::..::|::..|   |:|.           |.||::..::|::||||..:         
  Rat    50 VVGGEDSADAQWPWIVSILKNGSHH-----------CAGSLLTNRWVVSAAHCFSS--------- 94

  Fly   164 PNFDSPK-FVVRLGELDYNSTTDDALVQDFRVVNYVVHPGYDTEDEEQGFKNDIALVELDRKAEF 227
             |.|.|. :.|.||.....:....:  |...:.:.:.||.|   ..::|...|||||.|:|..:|
  Rat    95 -NMDKPSPYSVLLGAWKLGNPGPRS--QKVGIASVLPHPRY---SRKEGTHADIALVRLERPIQF 153

  Fly   228 NDHVAAVCLPPDSGNDVQQVT---AAGWGFTADGV---KSSHLLKVNLQRFSDEVCQKRLRF--- 283
            ::.:..:|| |||...:...|   .||||...|||   :...|.|:.:.....|:| |.|.:   
  Rat   154 SERILPICL-PDSSVHLPPNTNCWIAGWGSIQDGVPLPRPQTLQKLKVPIIDPELC-KSLYWRGA 216

  Fly   284 --SIDTRTQFCAGSMSSQADTCNGDSGGPIFVQ---HPLYPCLKQVIGIVSYGLVCGSQGLPSVY 343
              ...|....|||.:..:.|.|.||||||:..|   |.|      :.||:|:|..|..:..|.||
  Rat   217 GQEAITEDMLCAGYLEGKRDACLGDSGGPLMCQVDDHWL------LTGIISWGEGCAERNRPGVY 275

  Fly   344 TKVHLYTDWIESIVWG 359
            |.:..:..|::.||.|
  Rat   276 TSLLAHRPWVQRIVQG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113 78/271 (29%)
Prss22NP_001100454.1 Tryp_SPc 50..288 CDD:238113 78/271 (29%)

Return to query results.
Submit another query.