DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3700 and LOC116411715

DIOPT Version :9

Sequence 1:NP_611736.1 Gene:CG3700 / 37640 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_031760387.1 Gene:LOC116411715 / 116411715 -ID:- Length:386 Species:Xenopus tropicalis


Alignment Length:296 Identity:83/296 - (28%)
Similarity:129/296 - (43%) Gaps:55/296 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 QCKQYNEVRSACQSTPF------IVGGTKASGKEFPFMALIGTHRPNKSKSDINWDCGGSVVHPK 143
            :|:  :.:...|.:.|.      ||||..:...::|:|..|    .:.:..:.:..|||||::..
 Frog    21 ECE--SAIGGICGNRPLFNKGSRIVGGQNSPPGKWPWMVSI----QSPTGKEFSHLCGGSVLNEI 79

  Fly   144 FVLTAAHCLE----TDESKAERLDPNFDSPKFVVRLGELDYNSTTDDALVQDFRVVNYVVHP-GY 203
            :|||||||.:    .:|:|:.||....::.|.:             ::.|| .|.:..|:.| .|
 Frog    80 WVLTAAHCFKHLQRKEETKSWRLVFGANNLKVL-------------ESSVQ-IRKIKEVIQPKAY 130

  Fly   204 DTEDEEQGFKNDIALVELDRKAEFNDHVAAVCLPPDSGNDVQQVT---AAGWGFTAD--GVKSSH 263
            :...|    .|||.|:.||:...|.|:|...|.|.:..| |::.|   .||||...:  |..|..
 Frog   131 NPTTE----ANDITLLRLDKPIVFTDYVQPACFPTEFAN-VEKKTDCYIAGWGVLDEESGEPSEI 190

  Fly   264 LLKVNLQRFSDEVCQKRLRF-SIDTRTQFCAGSMSSQADTCNGDSGGPIFVQHPLYPCLKQ---- 323
            |.:..:.:...:.|..:..: ........|||......|:|.||||||:.       |..|    
 Frog   191 LQEARVHQIDSKKCNSKDWYDGAIGEYNLCAGHEKGGIDSCQGDSGGPLM-------CKTQKSRT 248

  Fly   324 --VIGIVSYGLVCGSQGLPSVYTKVHLYTDWIESIV 357
              |:||.|:|..|.....|.|||....:..||.|.|
 Frog   249 YAVVGITSWGSGCARGKKPGVYTSTKYFIKWIASKV 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113 78/270 (29%)
Tryp_SPc 102..353 CDD:214473 76/267 (28%)
LOC116411715XP_031760387.1 Tryp_SPc 41..280 CDD:214473 76/268 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.