DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3700 and LOC108648818

DIOPT Version :9

Sequence 1:NP_611736.1 Gene:CG3700 / 37640 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_017952796.2 Gene:LOC108648818 / 108648818 -ID:- Length:928 Species:Xenopus tropicalis


Alignment Length:289 Identity:82/289 - (28%)
Similarity:136/289 - (47%) Gaps:50/289 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 TRPFEKQCKQYNEVRSACQSTPF-----IVGGTKASGKEFPFMALIGTHRPNKSKSDINWDCGGS 138
            ||...|..|  .:|.:..:..|.     |||||.|....:|:.|.:.:          |:.||.|
 Frog   672 TRTITKTTK--TDVTACGKGGPSALEDKIVGGTNAVLGSWPWQAALVS----------NYLCGAS 724

  Fly   139 VVHPKFVLTAAHCLETDESKAERLDPNFDSPKFVVRLGELDYNSTTDDALVQDFRVVNYVVHPGY 203
            ::...:::|||||:.|:       |||    .:.||||.|.:.||     :..|::...::|..|
 Frog   725 LISNTWLVTAAHCIVTN-------DPN----SYTVRLGTLYWYST-----INRFKLQQIIIHENY 773

  Fly   204 DTEDEEQGFKNDIALVELDRKAEFNDHVAAVCLPPDSGN--DVQQVTAAGWGFTADGVKSSHLL- 265
            .:  ...|:  ||||::|.....|..::.:||||..|.:  |.......|||..:.|...|::| 
 Frog   774 TS--ATMGY--DIALLKLATPVTFTSYIQSVCLPEASSSFPDNSSCYITGWGTLSYGGSVSNILQ 834

  Fly   266 KVNLQRFSDEVCQKRLRFSIDTR-TQFCAGSMSSQADTCNGDSGGPIFVQH----PLYPCLKQVI 325
            :..::..|.::|...|.:....: :..|||.::...|:|.||||||:..::    ..|     ::
 Frog   835 EAQVEIISTKLCSSSLMYGSTIKPSMLCAGYVNGNIDSCQGDSGGPLVYRNSSDSSWY-----LV 894

  Fly   326 GIVSYGLVCGSQGLPSVYTKVHLYTDWIE 354
            ||:|:|..|.....|.||.:|....:||:
 Frog   895 GIISFGDGCAQAYRPGVYARVTYLRNWIK 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113 76/261 (29%)
Tryp_SPc 102..353 CDD:214473 74/258 (29%)
LOC108648818XP_017952796.2 Tryp_SPc 698..925 CDD:238113 76/261 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.