DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and fcl

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_416556.1 Gene:fcl / 946563 ECOCYCID:EG11788 Length:321 Species:Escherichia coli


Alignment Length:330 Identity:102/330 - (30%)
Similarity:175/330 - (53%) Gaps:24/330 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KKVLVTGGTGLVGKALEAVIKEQSPEDEQWFFAGSKDADLTNLAATQALFAREKPTHVIHLAAMV 66
            ::|.:.|..|:||.|:...::::.  |.:.......:.:|.:..|....||.|:...|...||.|
E. coli     4 QRVFIAGHRGMVGSAIRRQLEQRG--DVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKV 66

  Fly    67 GGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPIDETMVHNGPPHP 131
            ||:..|.....||:..|::|..|::..||:....|::...|:||:|.....|:.|:.:..|...|
E. coli    67 GGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEP 131

  Fly   132 SNYGYSYAK----RLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLV 192
            :|..|:.||    :|.:    :|:.:|||.|.||:|.|::|||||::|..|||||.::.|.|:..
E. coli   132 TNEPYAIAKIAGIKLCE----SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEAT 192

  Fly   193 TEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRN-----YESVEPII--LSADEVQEV 250
            .:  :.|:    ..|:|||.|:|:|::..|:|...|.|:..     .|:.:|::  ::.....:.
E. coli   193 AQ--NAPD----VVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDC 251

  Fly   251 TIFEVAQAVAKAFNFNGRLVCDTSKSDGQYKKTASNAKLRSFLPDYAFTDLETAINASVKWYIEN 315
            ||.|:||.:||...:.||:|.|.||.||..:|.....:|.. |..|....||..:.::.:|::||
E. coli   252 TIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQ-LGWYHEISLEAGLASTYQWFLEN 315

  Fly   316 YDQAR 320
            .|:.|
E. coli   316 QDRFR 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 98/320 (31%)
fclNP_416556.1 GDP_FS_SDR_e 5..313 CDD:187550 98/320 (31%)

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