DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and yeeZ

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_416520.1 Gene:yeeZ / 946538 ECOCYCID:G7089 Length:274 Species:Escherichia coli


Alignment Length:190 Identity:36/190 - (18%)
Similarity:65/190 - (34%) Gaps:59/190 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKALEAVIKEQSP------------EDEQWFFAGSKDADLTNLAATQALFAREK 55
            :::.|..|.:.|.| :..:||.:|            |.|.|         |.||..|.       
E. coli   106 RIIFTSSTSVYGDA-QGTVKETTPRNPVTNSGRVLEELEDW---------LHNLPGTS------- 153

  Fly    56 PTHVIHLAAMVG-----GLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKT 115
             ..::.||.:||     |.|        |........::.:...|.:   .|:..::..:...|.
E. coli   154 -VDILRLAGLVGPGRHPGRF--------FAGKTAPDGEHGVNLVHLE---DVIGAITLLLQAPKG 206

  Fly   116 SYPIDETMVHN--GPPHPS-NYGYSYAKRLIDVQNHAYHDKY----GRVYTSVIPCNIFG 168
            .:      ::|  .|.||: |..|....||:.::...:.:..    |::......||..|
E. coli   207 GH------IYNICAPAHPARNVFYPQMARLLGLEPPQFRNSLDSGKGKIIDGSRICNELG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 36/190 (19%)
yeeZNP_416520.1 SDR_a4 4..259 CDD:187576 35/187 (19%)

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