DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and SDR42E1

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_660151.2 Gene:SDR42E1 / 93517 HGNCID:29834 Length:393 Species:Homo sapiens


Alignment Length:273 Identity:62/273 - (22%)
Similarity:101/273 - (36%) Gaps:59/273 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KKVLVTGGTGLVGKALEAVIKE----------QSPEDEQWFFAGSK--DADLTNLAATQALFARE 54
            :.||:|||:|..|..|...:.:          .||  .|....|.|  ..|:.:|:..:..|...
Human     9 ESVLITGGSGYFGFRLGCALNQNGVHVILFDISSP--AQTIPEGIKFIQGDIRHLSDVEKAFQDA 71

  Fly    55 KPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVV-SCLSTCIFPDKTSYP 118
            ..|.|.|:|:........:|.|| ....|:...||:||....:...::| :.....||..:....
Human    72 DVTCVFHIASYGMSGREQLNRNL-IKEVNVRGTDNILQVCQRRRVPRLVYTSTFNVIFGGQVIRN 135

  Fly   119 IDETM----VHNGPPHPSNYGYSYAKRLIDVQ----NHAYHDK-YGRVYTSVI-PCNIFGP-HDN 172
            .||::    :|..|.|     ||..|.:.:.:    |....|: .|.:.|..: |..|:|| ...
Human   136 GDESLPYLPLHLHPDH-----YSRTKSIAEQKVLEANATPLDRGDGVLRTCALRPAGIYGPGEQR 195

  Fly   173 YNPE-VSHVIPGM-------------------IYRMHQLVTE-----KTDVPENDKVFTVFGSGM 212
            :.|. ||::..|:                   :.:.|.|.:|     |..:......|  ...|.
Human   196 HLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRADKGHIASGQPYF--ISDGR 258

  Fly   213 PLRQFVYSRDLAE 225
            |:..|.:.|.|.|
Human   259 PVNNFEFFRPLVE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 62/272 (23%)
SDR42E1NP_660151.2 3b-HSD_like_1_SDR_e 10..350 CDD:187672 62/272 (23%)

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