DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and YDR541C

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_010830.4 Gene:YDR541C / 852154 SGDID:S000002949 Length:344 Species:Saccharomyces cerevisiae


Alignment Length:133 Identity:29/133 - (21%)
Similarity:51/133 - (38%) Gaps:40/133 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKKVLVTGG-TGLVGKAL----EAVIKEQSPEDEQW----------FFAGSKDAD---------- 40
            :::|:||.. |.::..|.    ..|..|:|..:..|          :||..|.|:          
Yeast   121 VERVVVTSSCTAIITLAKMDDPSVVFTEESWNEATWESCQIDGINAYFASKKFAEKAAWEFTKEN 185

  Fly    41 -------LT----NLAATQALFAREKPTHVIHLAAMVGGLFHN-MNNNL-DFLRNNLLINDNVLQ 92
                   ||    :|.....||..:...|:.....|:.||.|. :|.:: ||  :::.|:...:.
Yeast   186 EDHIKFKLTTVNPSLLFGPQLFDEDVHGHLNTSCEMINGLIHTPVNASVPDF--HSIFIDVRDVA 248

  Fly    93 TAH 95
            .||
Yeast   249 LAH 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 29/131 (22%)
YDR541CNP_010830.4 AR_SDR_e 4..320 CDD:187538 29/133 (22%)

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