DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and YLL056C

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_013044.1 Gene:YLL056C / 850670 SGDID:S000003979 Length:298 Species:Saccharomyces cerevisiae


Alignment Length:136 Identity:30/136 - (22%)
Similarity:45/136 - (33%) Gaps:53/136 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKAL------------------EAVIKEQSPEDEQWFFAGS-KDADLTNLAATQ 48
            ||.:||.:|.:|.|:                  ||..|.:|.:.......|. ||.::....||:
Yeast     2 KVFITGASGFIGSAVLSELISSGHEVVGLARSDEAAAKIKSIDPAAKILRGDLKDLEILKKGATE 66

  Fly    49 ALFAREKPTHVIHLAAMVGGLFHNMNN----------------------NLDFLRNNLLINDNVL 91
            :       ..||||     |..|:..|                      |..||..|..::....
Yeast    67 S-------DGVIHL-----GFVHDFKNFEQCCEIDRQATVAMLESLKGSNKPFLYTNGTLSLRPN 119

  Fly    92 QTAHEQ 97
            :.|:||
Yeast   120 KVANEQ 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 30/136 (22%)
YLL056CNP_013044.1 SDR_a7 1..291 CDD:187572 30/136 (22%)

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