DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and YLL056C

DIOPT Version :9

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_013044.1 Gene:YLL056C / 850670 SGDID:S000003979 Length:298 Species:Saccharomyces cerevisiae


Alignment Length:136 Identity:30/136 - (22%)
Similarity:45/136 - (33%) Gaps:53/136 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKAL------------------EAVIKEQSPEDEQWFFAGS-KDADLTNLAATQ 48
            ||.:||.:|.:|.|:                  ||..|.:|.:.......|. ||.::....||:
Yeast     2 KVFITGASGFIGSAVLSELISSGHEVVGLARSDEAAAKIKSIDPAAKILRGDLKDLEILKKGATE 66

  Fly    49 ALFAREKPTHVIHLAAMVGGLFHNMNN----------------------NLDFLRNNLLINDNVL 91
            :       ..||||     |..|:..|                      |..||..|..::....
Yeast    67 S-------DGVIHL-----GFVHDFKNFEQCCEIDRQATVAMLESLKGSNKPFLYTNGTLSLRPN 119

  Fly    92 QTAHEQ 97
            :.|:||
Yeast   120 KVANEQ 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 30/136 (22%)
Epimerase 4..234 CDD:279681 29/135 (21%)
YLL056CNP_013044.1 SDR_a7 1..291 CDD:187572 30/136 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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