DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and BAN

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_176365.1 Gene:BAN / 842469 AraportID:AT1G61720 Length:340 Species:Arabidopsis thaliana


Alignment Length:317 Identity:63/317 - (19%)
Similarity:120/317 - (37%) Gaps:89/317 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KKVLVTGGTG-----LVGKALEAVIK----EQSPEDEQWFFAGSK----------DADLTNLAAT 47
            ||..|.||||     |:...|::..|    .:.||:|:......|          .||||:..:.
plant    11 KKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGDLKIFKADLTDEDSF 75

  Fly    48 QALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLS----- 107
            ::.|:..:  ::.|:|..:.  |.:.:...|.::..:....|||::..:...||.|...|     
plant    76 ESSFSGCE--YIFHVATPIN--FKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAV 136

  Fly   108 -------TCIFPDKTSYPIDETMVHNGPPHPSNYGYSYAKRLID--VQNHAYHDKYGRVYTSVIP 163
                   |.|..::.::...|.:...   .|.|:||..:|.|.:  ....|..:|...|  :|||
plant   137 SINNLSGTGIVMNEENWTDVEFLTEE---KPFNWGYPISKVLAEKTAWEFAKENKINLV--TVIP 196

  Fly   164 CNIFG------PHDNYNPEVSHV------IPGM-----------------IYRMHQLVTEKTDVP 199
            ..|.|      |..:.:..:|.:      :.|:                 :.|.|..:.|| :..
plant   197 ALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEK-ETA 260

  Fly   200 ENDKVFTVFGSGMPLRQFVYSRDLAELMIW------VLRNYE---SVEPIILSADEV 247
            ....:...:.:.:|        ::|:.:|.      ||..:|   |:..:.||:.::
plant   261 SGRYICCAYNTSVP--------EIADFLIQRYPKYNVLSEFEEGLSIPKLTLSSQKL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 62/316 (20%)
BANNP_176365.1 PLN00198 2..339 CDD:215100 63/317 (20%)

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