DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and 3BETAHSD/D1

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_849779.1 Gene:3BETAHSD/D1 / 841132 AraportID:AT1G47290 Length:439 Species:Arabidopsis thaliana


Alignment Length:291 Identity:60/291 - (20%)
Similarity:103/291 - (35%) Gaps:78/291 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVTGGTGLVGKAL-EAVIKEQ---------------SPEDEQWFFAGS--------KDADLTNLA 45
            :||||.|...:.| |.:::.|               :|.:|......:        ..|||.|  
plant    13 VVTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGILGEAIRSGRVQYVSADLRN-- 75

  Fly    46 ATQALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCI 110
            .||.:...:....|.|:||...    ::||:......|:....||:....|.|..:::...|..:
plant    76 KTQVVKGFQGAEVVFHMAAPDS----SINNHQLQYSVNVQGTTNVIDACIEVGVKRLIYTSSPSV 136

  Fly   111 FPDKT--SYPIDETMVHNGPPHPSNYGYSYA------KRLIDVQNHAYHDKYGRVYTSVIPCNIF 167
            ..|..  :...||::     |:|..:..||:      :.||...|    .:.|.:...:.|.:||
plant   137 VFDGVHGTLNADESL-----PYPPKHNDSYSATKAEGEALILKAN----GRSGLLTCCIRPSSIF 192

  Fly   168 GPHDNYNPEVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLR 232
            ||.|..      ::|.::          |........| :.|.|.....|.|..:       |:.
plant   193 GPGDKL------MVPSLV----------TAARAGKSKF-IIGDGSNFYDFTYVEN-------VVH 233

  Fly   233 NYESVEPIILSADEVQEVTIFEVAQAVAKAF 263
            .:...|..:.|..||       .|:|..:|:
plant   234 AHVCAERALASGGEV-------CAKAAGQAY 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 60/291 (21%)
3BETAHSD/D1NP_849779.1 3b-HSD-NSDHL-like_SDR_e 11..358 CDD:187673 60/291 (21%)

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