DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and AT1G25460

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001319080.1 Gene:AT1G25460 / 839132 AraportID:AT1G25460 Length:319 Species:Arabidopsis thaliana


Alignment Length:221 Identity:59/221 - (26%)
Similarity:85/221 - (38%) Gaps:58/221 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKKVLVTGGTGLV-----------GKALEAVIKEQSPEDEQ-----WFFAGSK------DADLTN 43
            |.:.||||||..:           |..:...:::   .||:     |...|:|      :|||| 
plant     1 MAEYLVTGGTSFIASHVIKSLLEFGHYVRTTVRD---SDEEKVGFLWDLKGAKERLKIFEADLT- 61

  Fly    44 LAATQALF--AREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQT-AHEQGCVK--VV 103
               .:..|  |......|.|:|:.|.....  |||||....|:....||:.: |..:..||  |:
plant    62 ---IEGSFDEAVNGVDGVFHIASRVSVRLD--NNNLDKFDPNISGTMNVMNSCAKSRNTVKRIVL 121

  Fly   104 SCLSTCIFPDKTSYPIDETMVHNGPPHPSNY-----------GYSYAKRLIDVQ--NHAYHDKYG 155
            :..||.|     .|..|.|.|  .|.:.|::           .|:|.|.|.:.:  ..|...|..
plant   122 TSSSTAI-----RYRFDATQV--SPLNESHWTDLEYCKHFKIWYAYKKTLGEKEAWRIAADKKLN 179

  Fly   156 RVYTSVIPCNIFGPHDNYNPEVSHVI 181
            .|.  |||....||..:..|..|.:|
plant   180 LVV--VIPSFCIGPILSPKPTSSPLI 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 58/219 (26%)
AT1G25460NP_001319080.1 FR_SDR_e 4..296 CDD:187661 58/218 (27%)

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