DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and CCR1

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_173047.1 Gene:CCR1 / 838165 AraportID:AT1G15950 Length:344 Species:Arabidopsis thaliana


Alignment Length:182 Identity:38/182 - (20%)
Similarity:65/182 - (35%) Gaps:48/182 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKKVLVTGGTGLV----GKALEAVIKEQSPED------------------EQ--WFFAGSKDADL 41
            :|:|::|...|.|    .:..|||:.|....|                  ||  |..|..|..||
plant   119 VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDL 183

  Fly    42 TNLAATQALFAREKPT------HVIHLAAMVGGLFHNMNNNLDFLRN----NLLINDN------- 89
            ..|.....|....:||      ||:.........:.|:......:|:    ::|:.:.       
plant   184 VVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGRY 248

  Fly    90 -VLQTAHEQGCVKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNYGYSYAK 140
             :.::|..:|  :||..|:. :||:   ||:.........|....|.::..|
plant   249 LLAESARHRG--EVVEILAK-LFPE---YPLPTKCKDEKNPRAKPYKFTNQK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 37/180 (21%)
CCR1NP_173047.1 PLN02214 1..344 CDD:177862 38/182 (21%)

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