DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and AT1G09480

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_172419.1 Gene:AT1G09480 / 837471 AraportID:AT1G09480 Length:369 Species:Arabidopsis thaliana


Alignment Length:331 Identity:62/331 - (18%)
Similarity:99/331 - (29%) Gaps:120/331 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KKVLVTGGTGLV-----------GKALEAVIKEQSPEDEQWFFAGSKDADLTNLAATQALFAREK 55
            |.|.|||.:|.:           |..::|.::                 |||:...|:       
plant    53 KLVCVTGASGYIASWIVKLLLLRGYTVKATVR-----------------DLTDRKKTE------- 93

  Fly    56 PTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIF--PDKTSYP 118
                 ||.|:.|.     ...|...:.:||...:..|..  :||..|....|...|  .|..:..
plant    94 -----HLLALDGA-----KERLKLFKADLLEESSFEQAI--EGCDAVFHTASPVFFTVKDPQTEL 146

  Fly   119 IDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHVI-- 181
            ||..:                |..::|.|               .|       ...|.|..||  
plant   147 IDPAL----------------KGTMNVLN---------------TC-------KETPSVRRVILT 173

  Fly   182 ---PGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQ----FVYSRDLAELMIWVLRNYESVEP 239
               ..:::|  |...|.:||.:.    |.|......|:    :..|:.|||...|.......::.
plant   174 SSTAAVLFR--QPPVEASDVVDE----TFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDM 232

  Fly   240 IILSADEVQEVTIFEVAQAVAKAFNFNGRLVCDTSKSDGQYKKTASNAKLRSFLPDYAFTDLETA 304
            ::|:..       |.....:....||:..|:.|....     |...|::.      |.|.|:...
plant   233 VVLNPG-------FIFGPLLQPTLNFSVELIVDFING-----KNPFNSRF------YRFVDVRDV 279

  Fly   305 INASVK 310
            ..|.:|
plant   280 ALAHIK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 61/330 (18%)
AT1G09480NP_172419.1 Rossmann-fold NAD(P)(+)-binding proteins <2..38 CDD:473865
PLN02986 48..369 CDD:178567 62/331 (19%)
Blue background indicates that the domain is not in the aligned region.

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