DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and AXS2

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_563807.1 Gene:AXS2 / 837341 AraportID:AT1G08200 Length:389 Species:Arabidopsis thaliana


Alignment Length:403 Identity:82/403 - (20%)
Similarity:129/403 - (32%) Gaps:167/403 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLVTGGTGLVGKAL-EAVIKEQ------------------SPEDEQWFFAGS------------- 36
            :.:.|..|.:|..| |.::.|.                  .|:..||  ||.             
plant    20 ICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVQW--AGRIQFHRINIKHDSR 82

  Fly    37 -----KDADLT-NLAA--TQALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQT 93
                 |.|||| ||||  |.|.: ..:|...|:            :|.:|.|......::|..:.
plant    83 LEGLIKMADLTINLAAICTPADY-NTRPLDTIY------------SNFIDALPVVKYCSENNKRL 134

  Fly    94 AHEQGCV---KVVSC--------------------LSTCIFPDKTSYPIDETMVHNGPPHPSNYG 135
            .|...|.   |.:..                    :|.|||               |......:.
plant   135 IHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIF---------------GSIEKQRWS 184

  Fly   136 YSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLVTEKTDVPE 200
            |:.||:||:...:|...:.|..:|.|.|.|..||..::       |||:            |.|.
plant   185 YACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDF-------IPGI------------DGPS 230

  Fly   201 N--DKVFTVFGSGM----PL---------RQFVYSRDLAELMIWVLRNYESVEPIILS-ADEVQE 249
            .  .:|...|.:.:    ||         |.|:|.:|..|.::.::.|.|.....|.: .:...|
plant   231 EGVPRVLACFSNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNE 295

  Fly   250 VTIFEVAQAVAKAFNFNGRLVCDTSKSDGQYKKTASNAKLRSFLPDYAFTDLETAIN------AS 308
            ||:.::|:.:.:.                                 ||....||||.      :|
plant   296 VTVRQLAEMMTEV---------------------------------YAKVSGETAIESPTIDVSS 327

  Fly   309 VKWYIENYDQARK 321
            .::|.|.||.:.|
plant   328 KEFYGEGYDDSDK 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 77/393 (20%)
AXS2NP_563807.1 PLN02427 4..389 CDD:178047 82/403 (20%)

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