DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and UXS3

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001078768.1 Gene:UXS3 / 836047 AraportID:AT5G59290 Length:357 Species:Arabidopsis thaliana


Alignment Length:332 Identity:71/332 - (21%)
Similarity:127/332 - (38%) Gaps:75/332 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKAL----------EAVIKEQSPEDEQWFFAGSKD----------ADLTNLAAT 47
            ::|::||.|.:|..|          |.|:.:.       :|.|||:          .:|.....|
plant    46 RILISGGAGFIGSHLVDKLMENEKNEVVVADN-------YFTGSKENLKKWIGHPRFELIRHDVT 103

  Fly    48 QALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFP 112
            :.|..  :...:.|||.....:|:.. |.:..::.|::...|:|..|...| .:::...::.::.
plant   104 EPLLI--EVDRIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYG 164

  Fly   113 DKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYG------RVYTSVIPCNIFGPHD 171
            |...:|..|:...|..|......|...||:.:.....||.::|      |::      |.:||..
plant   165 DPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF------NTYGPRM 223

  Fly   172 NYNP--EVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNY 234
            |.:.  .||:.|...:               ..:..||...|...|.|.|..|:.:.:|.::...
plant   224 NIDDGRVVSNFIAQAL---------------RGEALTVQKPGTQTRSFCYVSDMVDGLIRLMEGN 273

  Fly   235 ESVEPIILSADEVQEVTIFEVAQAVAKAFN--FNGRLVCDTSKSDGQYKKTASNA---------- 287
            :: .||  :.....|.|:.|:|:.|.:..|  ...::|.:|.....|.|...|.|          
plant   274 DT-GPI--NIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDISKAKEVLGWEPKV 335

  Fly   288 KLRSFLP 294
            |||..||
plant   336 KLREGLP 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 71/332 (21%)
UXS3NP_001078768.1 UGD_SDR_e 45..349 CDD:187541 71/332 (21%)

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