DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and AT5G19440

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_197445.1 Gene:AT5G19440 / 832064 AraportID:AT5G19440 Length:326 Species:Arabidopsis thaliana


Alignment Length:218 Identity:44/218 - (20%)
Similarity:71/218 - (32%) Gaps:77/218 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KKVLVTGGTGLV-----------GKALEAVIKEQSPEDEQWFFAGSKDADLTNLAATQALFAREK 55
            |.|.|||.:|.:           |..::|.:::  |.|.:               .||.|.:.|.
plant     8 KVVCVTGASGYIASWLVKFLLSRGYTVKASVRD--PSDPK---------------KTQHLVSLEG 55

  Fly    56 PTHVIHL------------AAMVG--GLFHNMNNNLDFLRNNLLIND-----------------N 89
            ....:||            :|:.|  |:||..:.         ..||                 |
plant    56 AKERLHLFKADLLEQGSFDSAIDGCHGVFHTASP---------FFNDAKDPQAELIDPAVKGTLN 111

  Fly    90 VLQTAHEQGCVK---VVSCLSTCIFPDKTSYP---IDETMVHNGPP--HPSNYGYSYAKRLIDVQ 146
            ||.:..:...||   |.|.::...:..|...|   :|||. .:.|.  ..|...|..:|.|.:..
plant   112 VLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETW-FSDPELCEASKMWYVLSKTLAEDA 175

  Fly   147 NHAYHDKYGRVYTSVIPCNIFGP 169
            ......:.|....::.|..:.||
plant   176 AWKLAKEKGLDIVTINPAMVIGP 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 43/217 (20%)
AT5G19440NP_197445.1 PLN02662 4..323 CDD:178268 44/218 (20%)

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