DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and FLDH

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_195062.1 Gene:FLDH / 829473 AraportID:AT4G33360 Length:344 Species:Arabidopsis thaliana


Alignment Length:353 Identity:73/353 - (20%)
Similarity:120/353 - (33%) Gaps:93/353 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKAL-----------EAVIKEQS------PEDEQWFFAGSKDADLTNL-AATQA 49
            |:||||.||.:|..|           .|:::..|      ||.|..:      .|:|:. :.|.|
plant    14 KILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPEVELAY------GDVTDYRSLTDA 72

  Fly    50 LFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDK 114
            ....:   .|.|.||:|.....:.:.   |:..|:....|||:...|...|:.:...|:......
plant    73 CSGCD---IVFHAAALVEPWLPDPSR---FISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALGS 131

  Fly   115 TSYPI-DETMVHNGPPHPSNYGYSYA---KRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNP 175
            |...: :|..|||.....:.|..|.|   |..::..:.      |.....:.|..||||.     
plant   132 TDGSVANENQVHNERFFCTEYERSKAVADKMALNAASE------GVPIILLYPGVIFGPG----- 185

  Fly   176 EVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPI 240
              ......|:.||   :.|:.    |.::....|||.....|.:..|:.|..:..:......|..
plant   186 --KLTSANMVARM---LIERF----NGRLPGYIGSGTDRYSFSHVDDVVEGHVAAMEKGRLGERY 241

  Fly   241 ILSADEVQEVTIFEVAQAV--AKAFNFN--------------------GRL-------------- 269
            :|:.:......:|::|..:  .|..||:                    |:|              
plant   242 LLTGENASFKLVFDMAALITGTKKPNFSIPLWAINAYGWLSVLISRVTGKLPLISPPTVTVLRHQ 306

  Fly   270 ---VCDTSKSDGQYKKTASNAKLRSFLP 294
               .||.:|.:..|...:....|...||
plant   307 WSYSCDKAKLELGYNPRSLKEGLEEMLP 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 73/353 (21%)
FLDHNP_195062.1 AR_FR_like_1_SDR_e 15..336 CDD:187539 72/352 (20%)

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