DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and AT4G27250

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_194455.2 Gene:AT4G27250 / 828833 AraportID:AT4G27250 Length:354 Species:Arabidopsis thaliana


Alignment Length:360 Identity:68/360 - (18%)
Similarity:134/360 - (37%) Gaps:87/360 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VTGGTGLVGKALEAVIKEQSPEDEQWFFAGSKDADLTNLAATQALFAREKPTHVIHL-------- 62
            |||.:|.:|..|...:.::         ..:..|.|.:||.::...::.|....:.|        
plant    15 VTGASGYIGSWLVKSLLQR---------GYTVHATLRDLAKSEYFQSKWKENERLRLFRADLRDD 70

  Fly    63 ----AAMVG--GLFH----------NMNNNLDFLRNNLLIND------NVLQTAHEQGCVKVV-- 103
                .|:.|  |:||          :.:.||:....:.:|..      |||.:..:...||.|  
plant    71 GSFDDAVKGCDGVFHVAASMEFDISSDHVNLESYVQSKVIEPALKGVRNVLSSCLKSKSVKRVVF 135

  Fly   104 -SCLSTCIFPDKT----SYPIDET----MVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYT 159
             |.:||....|:.    |: :|||    :.|......|.:.|..:|.:.:.:...|..:.|....
plant   136 TSSISTLTAKDENERMRSF-VDETCKAHVDHVLKTQASGWIYVLSKLVSEEEAFRYAKERGMDLV 199

  Fly   160 SVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGS---GMPLRQFVYSR 221
            |||...:.||.      ::..:|..:..:...:|      .:.|:|.:..:   .|.....|:..
plant   200 SVITTTVSGPF------LTPFVPSSVQVLLSPIT------GDSKLFAILSAVNKRMGSIALVHIE 252

  Fly   222 DLAELMIWVLRNYESVEPIILSAD--EVQEVTIFEVAQAVAKAFNFNGRLVCDTSKSDGQ----- 279
            |:....::::...::....|...|  ::.|:.:          .:|:...:|...|.:..     
plant   253 DICRAHLFLMEQPKAKGQYICCVDNIDMHELML----------HHFSKDYLCKVQKVNEDEEERE 307

  Fly   280 -YKKTASNAKLRSFLPDYAF---TDLETAINASVK 310
             .|...|:.|||....:|.:   ..::..|:||:|
plant   308 CMKPIISSKKLRELGFEYKYGIEEIVDQTIDASIK 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 68/360 (19%)
AT4G27250NP_194455.2 PLN02896 1..354 CDD:178484 68/360 (19%)

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