DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and GAE3

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_191922.1 Gene:GAE3 / 828145 AraportID:AT4G00110 Length:430 Species:Arabidopsis thaliana


Alignment Length:379 Identity:83/379 - (21%)
Similarity:137/379 - (36%) Gaps:105/379 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLVTGGTGLVGKALEAVIK-----------------------EQSPEDEQWFFAGSKDADLTNLA 45
            |||||..|.||..:.|.:|                       .|:..:....|.  .:.|:.:.|
plant    93 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFV--VEGDINDAA 155

  Fly    46 ATQALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQ---TAHEQGCVKVVSCLS 107
            ..:.||.....|||:||||. .|:.:.|.|...::.:|:....|:|:   :|:.|..  :|...|
plant   156 LLKKLFEVVPFTHVMHLAAQ-AGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPA--IVWASS 217

  Fly   108 TCIFPDKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDN 172
            :.::...|..|..|   .:....|::. |:..|:..:...|.|:..||...|.:....::||...
plant   218 SSVYGLNTKVPFSE---KDRTDQPASL-YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGR 278

  Fly   173 YNPEVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVF---GSGMPLRQFVYSRDL----------- 223
                     |.|.|...     ..|:.:. |..::|   ..|...|.|.|..|:           
plant   279 ---------PDMAYFFF-----TRDILKG-KAISIFEGVNHGTVARDFTYIDDIVKGCLGALDTA 328

  Fly   224 -------------AELMIWVLRNYESVEPIILSADEVQEVTIFEVAQAVAKAFNF-----NGRLV 270
                         |:|.::.|.|...| |:      ...|||.|....|....|.     ||   
plant   329 EKSTGSGGKKRGAAQLRVFNLGNTSPV-PV------TDLVTILERLLKVKAKRNIMKLPRNG--- 383

  Fly   271 CDTSKSDGQYKKTASNAKLRSFLPDYAF---TDLETAINASVKWYIENYDQARK 321
                  |.|:    ::|.:.|...:..:   |||:|.:....:||:..|:..:|
plant   384 ------DVQF----THANISSAQRELGYKPTTDLQTGLKKFARWYLGYYNGGKK 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 80/369 (22%)
GAE3NP_191922.1 Rossmann-fold NAD(P)(+)-binding proteins 93..421 CDD:473865 81/371 (22%)

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