DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmer and UXS5

DIOPT Version :10

Sequence 1:NP_611734.1 Gene:Gmer / 37638 FlyBaseID:FBgn0267823 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_190228.1 Gene:UXS5 / 823794 AraportID:AT3G46440 Length:341 Species:Arabidopsis thaliana


Alignment Length:325 Identity:69/325 - (21%)
Similarity:125/325 - (38%) Gaps:61/325 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVLVTGGTGLVGKALEAVIKEQSPED---EQWFFAGSKD----------ADLTNLAATQALFARE 54
            ::|::||.|.:|..|...:.|....:   ...:|.||||          .:|.....|:.|..  
plant    30 RILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLI-- 92

  Fly    55 KPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPI 119
            :...:.|||.....:|:.. |.:..::.|::...|:|..|...| .:::...::.::.|...:|.
plant    93 EVDQIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGDPLIHPQ 155

  Fly   120 DETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYG------RVYTSVIPCNIFGPHDNYNP--E 176
            .|:...|..|......|...||:.:.....||.::|      |::      |.:||..|.:.  .
plant   156 PESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF------NTYGPRMNIDDGRV 214

  Fly   177 VSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPII 241
            ||:.|...:               ..:..||...|...|.|.|..|:.:.::.::.. :...|| 
plant   215 VSNFIAQAL---------------RGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEG-DDTGPI- 262

  Fly   242 LSADEVQEVTIFEVAQAVAKAFN--FNGRLVCDTSKSDGQYKKTASNA----------KLRSFLP 294
             :.....|.|:.|:|:.|.:..|  ...::|.:|.....|.|...:.|          |||..||
plant   263 -NIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLREGLP 326

  Fly   295  294
            plant   327  326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmerNP_611734.1 GDP_FS_SDR_e 3..313 CDD:187550 69/325 (21%)
UXS5NP_190228.1 UGD_SDR_e 29..333 CDD:187541 69/325 (21%)

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